It seems you are establishing a direct equivalence of theory and scientific object. ... What am I missing?
The term isn't mine, as I've noted. It came from Noble. I'm using it per the impression I got from his text, but he gave no explicit definition. Therefore, it seems silly for me to suddenly pull an explicit definition from thin air ... and somewhat unfair to you.
The original message was that Noble, Longo, Soto, et. al. seem to be saying (and I agree) that without a theory, science has no grounding. There is no arbiter for what the data means, for working out the implications of one conclusion vs. another, what is proper data and what is not, what causes a phenomena and what doesn't. They cite specific examples of the problems they have had in their own research because of the lack of theory. Therefore, it is best to read them firsthand rather than trying to squeeze it out of me.
IMHO, the idea that the data is enough - that data obviously says what it says - that meaning can precede theory - is nonsense. I believe people who make such statements are simply not acknowledging (or aren't even aware) of the theory they're using.
I don't think
@FrumiousBandersnatch and I are using "axiom" in the same way. As I said, it seems like a semantic battle.
This all began with the question: Does biology have a fundamental theorem or first principle? My reaction (erroneous though it may be) was, "No, but it should." But then I paused and asked myself, "What is a first principle?" I couldn't answer that question, but Ana Soto did, and I love her answer:
A first principle defines the default (unconstrained) state of a system.
I think that's brilliant. It does, however, introduced Mach's dilemma (I think it was Mach who made this observation about "force"). We never see this pure, default, unconstrained state in nature. This state is, therefore, only conceptual. Given the first principle is based on a concept, we would never be able to refute it. Suppose we account for all the forces on an object, yet still fail to fully describe its motion. We wouldn't say, "Nuts. I guess something other than forces are involved." No, we would say, "There must be an as yet undiscovered force involved."
Sorry. More rambling. I'll go look for a 12-step program and leave you alone.