The skull isn't shielded against EM fields, so whenever electrics move at all within the brain there will be a very small external field produced. Brain functions can be affected by EM fields, but they must be strong, and the effect is minor.
Actually, it you read through that link, you'll find a link to research on a "God helmet" that demonstrates that intelligently guided external EM fields are capable of producing some fairly significant effects inside the brain.
The magnitude of these macroscopic EM waves won't be strong enough to do much of anything to the brain, and the small EM fields generated by the brain won't be able to do much of anything even to spaces nearby the brain, let alone EM fields on cosmic scales.
Checkout that link on the God helmet. You can probably Google it too. The effect isn't necessarily as small as you imagine. Many of the participants compared it to a "spiritual" experience, for good reason IMO.
That is a pretty huge leap of logic.
Not really. There are numerous and exotic examples of interwoven circuitry giving rise to awareness in physical material on Earth. What is so "huge" about the connection of EM fields to awareness other than the scaling factors required?
Compared to "dark matter did it", or "dark energy did it", or "inflation did it"? Talk about pure LEAPS of faith. When has dark energy ever "accelerated" even a single atom on Earth?
Is this the Christian god that is made of EM waves or just a generic god type being?
It would necessarily just be "God". Christians wouldn't own the universe any more than Hindus own the universe.
Does this god perform miracles and answer prayers?
Define "miracles". I tend to favor the laws of physics myself. I doubt I fully understand ALL of those laws however. A being of ancient origin and greater sophistication is likely to be able to MANIPULATE such laws in ways I can't possibly fathom at the moment, but I would still expect such events to be explainable at the level of actual physics in one way or another, even I can't personally do so.
How do you know it's one kind of god and not another?
You're confusing kinds of "religions", with kinds of UNIVERSES.

There's only one kind of universe/God but religions are about a dime a dozen.
It "interacts" with me. I "hear" the universe, but typically not in English sentences.
I never called it exotic matter, that's a phrase you keep repeating for some reason, as if it really, really offends you.
You're right about one thing, the concept of exotic forms of matter does tend to "offend" me personally a bit, particularly as it's applied to the topic of space. While you PERSONALLY may not necessarily believe that dark matter is not "typical" in nature, the "Official Dogma" say's otherwise:
Dark Energy, Dark Matter - NASA Science
We are much more certain what dark matter is not than we are what it is. First, it is dark, meaning that it is not in the form of stars and planets that we see.
I just showed you recent links that suggest that dark matter *IS* actually composed of small stars we underestimated and large mass stars we underestimated too. I'll give you personal wiggle room however, because the term "dark matter' was pretty much equated with MACHO forms of dark matter when I was in college. It's only "morphed" into metaphysical mythology in the last couple of decades.
I don't know what dark matter is, only that it is a measurable force. It could be normal matter that, for reasons we don't understand, doesn't interact with light in a normal way, or it could be some other effect.
That puts you ahead of "party line dogma" already.
It might be something that only comes in to play at very large length scales, etc. It is an unknown. Much like the interior of a black hole there isn't much to be said about it at this point, but perhaps in the future there will be.
It's interesting that you leave so much room for "large length scales", yet resist the concept of large scale awareness.
If the universe is aware in the way that humans are aware it will need some kind of network of logic gates, like neurons. No such structure exists that we are aware of.
Every sun has trillions of "circuits" flowing though just the outside atmosphere that we can actually observe, let alone what goes in inside the interior of that structure. A galaxy is nothing more than a network of intwoven circuitry according to Hannes Alfven the guy that wrote the book on plasma physics and how it should be properly applied to events in space.
If there is a macro network like that the time scales on which the universe would 'think' would be far greater that than of a human, if only because of the speed of light limiting the speed of information transfer.
You're "assuming" the "thinking" process takes place "globally" rather than locally (in suns) and globally in clusters. I see no reason to make such an assumption.
There is also no reason to believe that this thinking universe would even be aware let alone deeply concerned about the goings on of a particular creature on a particular planet among so many billions, any more than a human is deeply concerned about a specific skin cell.
You're right, but then we wouldn't expect all those humans throughout human history to report having an active relationship with something they call God if that were the case.
That kind of god is totally disconnected from humanity and whether or not it exists means nothing to us.
Disconnected? How is that even possible? We would necessarily be living INSIDE of a living organism. No "disconnection" is possible at the level of physics, even if I personally remain "unaware" of God's presence and God's awareness.