Ugh... I have never been able to really get into organic chemistry. I used to work with a guy that was majoring in it, and in our down time, he would sit at the desk and doodle bonds and structures. He almost seemed to enjoy it! LOL Different strokes for different folks, I guess.
Quantum theory is definitely a big interest of mine... but, as I said in a different thread, I think too much focus on quantum theory can distract a person from the reality around them. In the other thread, I referenced Schrödinger's cat, and his assertion about quantum theory leading to impossible ideas about the natural world. I'm not saying the study of quantum theory is fruitless... but I think people (in ALL fields) need to keep their feet planted on the ground.
On the issue of black and white... I'm somewhat interested in your thoughts here. One of the things I remember about chemistry was balancing "equations" (not sure if that relates to the transitional-states point you mentioned)... I can certainly appreciate the complexity, but from a fundamental perspective, do you really think the issue is
not black and white?
I'll put own thoughts out there just to give you an idea of what I mean.
One of the cornerstones of science is predictability. If I know all of the factors going into a given reaction, I should be able to accurately predict the result. If the result is different than the prediction, then either my understanding of the factors was flawed, or my process for testing the prediction was flawed.
Granted, there are a number of complex variables involved... but from a very fundamental level, I believe it is still very black and white.