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Where did the laws of nature come from?

stevevw

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Wow, geographic formations are continuously changing, and do so frequently. Just consider the impact of that earthquake in Japan back in 2011 http://phys.org/news/2011-03-quake-japan-feet-usgs.html http://www.nasa.gov/topics/earth/features/japanquake/earth20110314.html

Furthermore, the material does not stay solid, but as it moves, portions of the Earth's crust become part of the liquid, molten layer of the planet, and other portions rise to become a part of the crust.
Yeah I have to agree but I was trying to explain how life was different. The word is probably organic rather then solid matter. A rock that was around in the beginning may change and become molten and then change its makeup to consist on another form of solid material. That original rock isn't really evolving organically which is what I was referring to that takes time to evolved from simple life to more complex life.
 
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stevevw

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That "but" is where the post goes quite wrong, stevevw.
You go from the descriptive power of a scientific theory such as evolution and leap to an incorrect assertion about evolution. The theory of evolution has been verified by an enormous amount of evidence. For example, how fossil remains of eyes change with time are verification of the theory.
A fossil record doesn't prove a theory scientifically and to base a theory on circumstantial evidence isn't a good way to prove something. Only a test on the actually mechanism that claims that a simple eye can morph into a complex will verify the theory and that hasn't been done. Tests have been done in labs on bacteria and they dont even show that new information can build new functional features. In fact the opposite has been shown. Some say there were very complex eyes in the Cambrian period which show that the information for making complex eyes was around very early in the scheme of things.

I also see that you use "Darwin's theory" in some posts implying that the theory stopped with Darwin which you must know is not the case. No one is actually chipping away at the "foundations" of evolution. Scientists are recognizing that evolution is a lot more complex than Darwin's original idea and have added more mechanisms. That is adding to the foundations and making the theory more robust.
Many of the mechanisms you talk about are non adaptive processes or processes that show predetermined genetic material being called upon for allowing life to change rather then from adaptive processes that are more unguided and in many cases dont fit the evidence of what is happening. They question the role of natural selection and either diminish it to the side lines or say that it may not play much of a role at all.
 
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stevevw

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The human eye is not the only eye. Its evolution can be studied via simpler, more primitive creatures and their "eyes."
Yes but is it a case that different creatures require different eyes for their particular environments and therefore we would expect to find many varying eyes of different degrees of complexity and use rather then assuming that the eye just popped into existence without any pre-existing design code that allowed it to form into many different types. How does someone explain how an eye can form out of no eye in the first place. I know about the stories evolution tells of simple patch eyes being the start of eyes but this is a good example of descriptions that then take on more creative power then what is verified. It all sounds good but it has never been verified and its the step by step process of a blind process like evolution being experimentally proven and able to create more complex info that just aint there thats in dispute.

If we say that there is some sort of mechanism inbuilt in life that can call upon that info when needed to then create more complex life or new info and features then that would make more sense then believing that somehow a blind process is able to craft such design in any decent time frame or at all considering the amount of things that would need to happen and fall into place to do so. As posted before it seems the evidence shows that if anything a blind process of random mutations will more than likely make unfit life or be forever dealing with things that dont move towards better and fitter life.
 
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Hoghead1

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Yes but is it a case that different creatures require different eyes for their particular environments and therefore we would expect to find many varying eyes of different degrees of complexity and use rather then assuming that the eye just popped into existence without any pre-existing design code that allowed it to form into many different types. How does someone explain how an eye can form out of no eye in the first place. I know about the stories evolution tells of simple patch eyes being the start of eyes but this is a good example of descriptions that then take on more creative power then what is verified. It all sounds good but it has never been verified and its the step by step process of a blind process like evolution being experimentally proven and able to create more complex info that just aint there thats in dispute.

If we say that there is some sort of mechanism inbuilt in life that can call upon that info when needed to then create more complex life or new info and features then that would make more sense then believing that somehow a blind process is able to craft such design in any decent time frame or at all considering the amount of things that would need to happen and fall into place to do so. As posted before it seems the evidence shows that if anything a blind process of random mutations will more than likely make unfit life or be forever dealing with things that dont move towards better and fitter life.
I didn't say evolution is a blind process.
 
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stevevw

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I didn't say evolution is a blind process.
Well then thats where you and I and many others differ as evolution is said to be a blind process. Because it doesn't know for example that creatures need eyes or brains to be able produce the needed genetic info to make them in any organized step by step process. It has to blindly sift through many possibilities to find the precise and special set of defined codes. Yet what are seeing more and more directional and pre set qualities about life all the time. Thats why I mentioned earlier why not evolution produce four eyes and have a couple in the back of the head. If it is blindly driven by the need to get some survival advantage surely eyes in the back of the head would have been ideal. We would see all sorts of strange and wonderful possibilities. But instead it seems we have just what we need without too much evidence of a hit and miss process along the way.
 
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stevevw

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How old is the earth in your opinion?
I am not sure how old the earth is but scientists say its over 4.5 billion years old. I am always sus of how someone can date such a long period of time but I know that the earth is very old by what we see with some things that take time to happen.
Do evolution occur at all? If so, are there limits?
Yes and I have acknowledged this many times. We see this in the different features of species such as size and color ect. But its limited and the evidence seems to support this. What some do is take this limited ability for creatures to change is some features and expand that to well beyond what has been scientifically verified. Tests done have shown there are barriers to limit the ability of creatures to move to far from their natural state and there is a fitness cost to this. Life has other processes that allow creatures to share the genetic material available and this is more responsible for how creatures can gain extra genetic info and change.
Which role do god(s) play in the creation of life in your opinion?
All I know is that God is responsible for the creation of life from non life. In the beginning there was nothing and then there was life. Whichever way you look at it nothing produces nothing so at some point there has to be a supernatural intervention that defies the scientific view. The details for how this happened I dont know. But life seems to have too much design and pre determined organization to not have some code that was meant to be there to direct it. Its not a blind naturalistic process that can produce new and complex things out of simple things that never had that in the first place. Thats just an extension of the belief and giving power to the ability of nothing producing something.
 
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Hoghead1

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Well then thats where you and I and many others differ as evolution is said to be a blind process. Because it doesn't know for example that creatures need eyes or brains to be able produce the needed genetic info to make them in any organized step by step process. It has to blindly sift through many possibilities to find the precise and special set of defined codes. Yet what are seeing more and more directional and pre set qualities about life all the time. Thats why I mentioned earlier why not evolution produce four eyes and have a couple in the back of the head. If it is blindly driven by the need to get some survival advantage surely eyes in the back of the head would have been ideal. We would see all sorts of strange and wonderful possibilities. But instead it seems we have just what we need without too much evidence of a hit and miss process along the way.
Yes, but that certainly does not rule out an evolutionary process.
 
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quatona

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He is not "smuggling," he is trying to interact them.
He´s considering scientific findings when forming/justifying his philosophy, to be precise. That´s not science, and it doesn´t affect the scientific finding. So nothing about evolution theory is or will ever get theistic or atheistic.
 
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stevevw

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Do we need to go over this AGAIN?????
3 genes. That's it. That is the grand total of genes acquired in the human lineage through HGT since the common ancestor shared with primates.
JUST 3!!!!
This, compared the tens of thousands of genes acquired through VGT.
So why should any biologist think HGT had anything more than a very, very minor role in human evolution?
Just going back over some posts and I found this one. In having another look at the evidence I found that even the paper you cited states that HGT is way more abundant that thought. It seems there were more than just 3 genes that came from HGT. I think you may be confusing 3 HGT events rather than single genes as the paper mentions finding 33 and not 3 genes.

Although observed rates of acquisition of horizontally transferred genes in eukaryotes are generally lower than in prokaryotes, it appears that, far from being a rare occurrence, HGT has contributed to the evolution of many, perhaps all, animals and that the process is ongoing in most lineages. Between tens and hundreds of foreign genes are expressed in all the animals we surveyed, including humans.
We also resolve the controversy surrounding previous evidence of HGT in humans and provide at least 33 new examples of horizontally acquired genes.
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-015-0607-3

Humans may harbor more than 100 genes from other organisms
You—and everyone else—may harbor as many as 145 genes that have jumped from bacteria, other single-celled organisms, and viruses and made themselves at home in the human genome.
http://www.sciencemag.org/news/2015/03/humans-may-harbor-more-100-genes-other-organisms

Human genome includes 'foreign' genes not from our ancestors

In humans, they confirmed 17 previously-reported genes acquired from horizontal gene transfer, and identified 128 additional foreign genes in the human genome that have not previously been reported.
http://www.cam.ac.uk/research/news/human-genome-includes-foreign-genes-not-from-our-ancestors

There are many other cases of HGT where humans share large chunks of DNA with distantly related animals such as Kangaroos and mice and other animals sharing chunks of DNA with distantly related animals. IE cows share genes with snakes that make them close then a cow should be to a horse. The horse dont have these genes so the genes have been acquired through HGT. This is very common and is partly why the tree of life has so many conflicts in the molecular evidence.


How a quarter of the cow genome came from snakes
If you draw BovB’s family tree, it looks like you’ve entered a bizarre parallel universe where cows are more closely related to snakes than to elephants, and where one gecko is more closely related to horses than to other lizards.
http://phenomena.nationalgeographic.com/2013/01/01/how-a-quarter-of-the-cow-genome-came-from-snakes/


New discoveries have found more and more occurrences now and especially in the past. In fact according to one famous scientists Carl Woese HGT was virtually responsible for how how gained all of its complexity very early in the development of life and from that time the DNA has remained more or less the same with only adjustments of existing genetic material to allow for changes. So this sort of makes evolution by random mutations a little redundant because all the needed info was more or less there to be tapped into and didn't need to be mutated into existence. Heres a few of the extracts I found which clearly tell us that HGT played a massive role in how all life including complex life was able to gain genes via HGT.

Here is support for what I was talking about with life beginning as a forest rather than a tree. So many lines of original forms began life and not a single trunk as Darwin's theory states. The genetic code for life was established very early in life and successions of HGT events spread genetic material to all living things for which events like the Cambrian explosion support. All the needed genetic info was there early and available to be tapped into when needed and as the paper states HGT played a major role and was the only way for life to quickly gain the genetic info needed to grow and change. Since that time its just been a case of adjusting genetic info that was already there. Even the great Carl Woese supports this theory.


Horizontal and vertical: The evolution of evolution

According to Woese and Goldenfeld, they are profound, and horizontal gene transfer alters the evolutionary process itself. Since micro-organisms represented most of life on Earth for most of the time that life has existed – billions of years, in fact – the most ancient and prevalent form of evolution probably wasn’t Darwinian at all, Woese and Goldenfeld say.

In particular, he argues, nothing in the modern synthesis explains the most fundamental steps in early life: how evolution could have produced the genetic code and the basic genetic machinery used by all organisms, especially the enzymes and structures involved in translating genetic information into proteins. Most biologists, following Francis Crick, simply supposed that these were uninformative “accidents of history”


Second, in none of their runs did any of the codes evolve to reach the optimal structure of the actual code. “With vertical, Darwinian evolution,” says Goldenfeld, “we found that the code evolution gets stuck and does not find the true optimum.”

Horizontal is optimal
The results were very different when they allowed horizontal gene transfer between different organisms. Now, with advantageous genetic innovations able to flow horizontally across the entire system the code readily discovered the overall optimal structure and came to be universal among all organisms.

However the simulations suggest that horizontal gene transfer allowed life in general to acquire a unified genetic machinery, thereby making the sharing of innovations easier. Hence, the researchers now suspect that early evolution may have proceeded through a series of stages before the Darwinian form emerged, with the first stage leading to the emergence of a universal genetic code. “It would have acted as an innovation-sharing protocol,” says Goldenfeld, “greatly enhancing the ability of organisms to share genetic innovations that were beneficial.” Following this, a second stage of evolution would have involved rampant horizontal gene transfer, made possible by the shared genetic machinery, and leading to a rapid, exponential rise in the complexity of organisms.
https://www.newscientist.com/articl...-evolution-of-evolution/?full=true&print=true

The gene that jumped
Researchers have also documented countless cases of viruses shuttling their genes into the genomes of animals, including our own.


Scientists such as Ford Doolittle and Carl Woese at the University of Illinois have argued that this portrayal is an oversimplification. Rather than rising from a single trunk, they say, the tree of life stands on an interweaving root system. Rather than evolving from one ‘last universal ancestor’, all life arose from a communal pool of primitive cells with unbridled zeal for exchanging DNA.

https://aeon.co/essays/genes-that-jump-species-does-this-shake-the-tree-of-life

Scientists uncover transfer of genetic material between blood-sucking insect and mammals
Millions of years ago, tranposons jumped sideways into several mammalian species. The transposon integrated itself into the chromosomes of germ cells, ensuring it would be passed onto future generations. Thus, parts of those mammals' DNA did not descend from their common ancestors, but were acquired laterally from another species.

When the human genome was sequenced a decade ago, researchers found that nearly half of the human genome is derived from transposons, so this new knowledge has important ramifications for understanding the genetics of humans and other mammals.
https://www.sciencedaily.com/releases/2010/04/100430155856.htm

Multiple "Promiscuous" Gene Transfers Found to Occur in Complex Cells
Multiple independent gene transfers are now documented to occur in the evolutionary history of eukaryotic life, not just among prokaryotes
http://www.scientificamerican.com/a...ne-transfers-found-to-occur-in-complex-cells/



 
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PsychoSarah

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Yeah I have to agree but I was trying to explain how life was different. The word is probably organic rather then solid matter. A rock that was around in the beginning may change and become molten and then change its makeup to consist on another form of solid material. That original rock isn't really evolving organically which is what I was referring to that takes time to evolved from simple life to more complex life.
1. Organic in terms of chemistry, or organic by the biology definition. I have words in response to either, but I want clarification, because those definitions are different.
2. the way you word your whole paragraph is a tad confusing. At first, it seems like you are suggesting that the world is alive, but then it sounds like you argue against that concept.
 
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stevevw

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Yes, but that certainly does not rule out an evolutionary process.
It does question what is claimed by Darwin's theory though. I am not ruling out evolution altogether and most people agree that there is some sort of evolution of life happening because we see animals change. Even dog breeders show us that they can produce a new breed of dog. We have observed it with changes like what happened with Darwin's finches he observed being able to evolve different beak sizes. But they are all changes within the limits of a species. Changes in color, size etc is an adjustment to existing genetic info.

Its not that evolution doesn't happen its the quality and quantity that's in question. Some people are questioning the ability of Darwin,s theory through random mutations and natural selection to be able to evolve what we see and certainly it hasn't been scientifically verified. So it may not rule it out completely but it certainly doesn't automatically rule it in as some say.
 
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stevevw

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1. Organic in terms of chemistry, or organic by the biology definition. I have words in response to either, but I want clarification, because those definitions are different.
2. the way you word your whole paragraph is a tad confusing. At first, it seems like you are suggesting that the world is alive, but then it sounds like you argue against that concept.
I think you may be misunderstanding what the original point was in regards to this. I was saying that tests done to see if evolution through mutational changes to proteins can find the precise structures needed for life in among the billions of possibilities. I said tests showed it unlikely and even if it was possible to make small changes it takes a very long time. I used the example of how scientists talk about the millions of years it takes for something to evolve or the 3 plus billion years it took to go from single celled life to multi celled life. Hoghead 1 said that they know how evolution works from the fossil records. I said the fossil records show that it took a long time anyway.

I dont even know why geology was brought into it anyway as I was talking about how long it takes evolution to evolve complex life to show that its not an easy thing to do and requires time. Going from pint A to point B isn't just a case of a straight line and easily finding the right ingredients. The evidence shows that there is a lot more to making life and mutations through natural selection doesn't seem to have what it takes to do it because of the hit and miss process it involves. What we see is that many different and distantly related creatures find similar designs right down to the molecular level over and over again as though the code for life was pre determined or the genetic info is somehow available to many creatures without having to somehow find it through adaptations. That there are set paths that are followed rather then a tit for tat process of trial and error.
 
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A fossil record doesn't prove a theory scientifically ...
A fossil record does prove a theory scientifically as you put it. Thinking that we actually can duplicate millions of years of evolution of the eye is a fantasy. Especially since it has already been done and recorded in that fossil record. Add in that we apply the mechanisms to natural selection to photosensitive cells in computer simulations and get focused lens eyes: A pessimistic estimate of the time required for an eye to evolve (Nilsson DE, Pelger S. 1994)

You may want to read up on the evolution of the eye, e.g. Evolution of the eye

New information is created in the genes all the time- this is called mutation :eek:!
A bacteria that could not eat something has gained the new information to eat that, e.g. nylon that has never existed in nature: Nylon-eating bacteria.
See the E. coli Long-term Experimental Evolution Project (bacteria gain new information - a wide array of genetic changes).
Look up how bacteria flagella may have evolved from the Type III secretory and transport system.
Look up how the vertebrate blood clotting cascade evolved: Step-by-step evolution of vertebrate blood coagulation.
Read any biology text book for many other examples of species gaining new information. Speciation which we have observed happening is genes gaining enough new information that a population is distant from another population!

I have not mentioned any such mechanisms.
Citations, please stevew, to the scientific literature on these mechanisms that you talk about which that that they "diminish it [natural selection] to the side lines or say that it may not play much of a role at all".
 
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Yes but is it a case that different creatures require different eyes for their particular environments and therefore we would expect to find many varying eyes of different degrees of complexity and use rather then assuming that the eye just popped into existence without any pre-existing design code that allowed it to form into many different types. ....
That answer is obviously: No it is not a case because that would expose some startling ignorance of evolution and there is no such thing as "pre-existing design code" except in the dreams of the intelligent design crew, stevevw :eek:!
We (rational, knowledgeable people) read about the evolution of the eye on Wikipedia and in biology textbooks. Scientists look at the "many varying eyes of different degrees of complexity" and see a evolutionary tree of gradual change from the light sensitive cells of bacteria to the various complex eyes. We see genes mutating as they have always mutated and natural selection acting on populations.
 
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Well Because it doesn't know for example that creatures need eyes or brains to be able produce the needed genetic info to make them in any organized step by step process.
stevevw, maybe you want to read up about the actual scientific theory of evolution?
Incredibility does not invalidate evolution and can be dispelled by learning and understanding evolution. The basics are fairly easy. When there is a population where individuals differ (they are not all clones) then the environment will favour the propagation of genes from those individuals who best fit the environment. That produces a population with a better fit to the environment with lots of hit and miss along the way.
Evolution does produce sort of "eyes in the back of the head". Most spiders have four pairs of eyes on the top-front area of the cephalothorax, arranged in patterns that vary from one family to another. Notice that cave spiders evolved to have no eyes. This is another part of evolution - growing organs costs energy so their numbers tend to be minimized.
 
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Hoghead1

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He´s considering scientific findings when forming/justifying his philosophy, to be precise. That´s not science, and it doesn´t affect the scientific finding. So nothing about evolution theory is or will ever get theistic or atheistic.
True, the world of science is neutral on the question of God. It is not there to prove or disprove God. However, evolution has impact beyond the world of science and that's where philosophy and theology come into the picture.
 
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PsychoSarah

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I think you may be misunderstanding what the original point was in regards to this. I was saying that tests done to see if evolution through mutational changes to proteins can find the precise structures needed for life in among the billions of possibilities.
1. you're assuming that they were as precise when life first formed as they are now, which is not the case. All living cells on Earth have acquired billions of years of added complexity and specificity that is not inherently necessary for life, just for modern life. Also, there is a decent amount of variation in the protein needs of various modern organisms, and plenty of organisms don't produce them themselves, but rather consume them from the environment or other organisms.

2. I request a source for your claim, preferably a scientific journal.

3. Natural selection applies to proteins as well; life developed in steps, not all at once, thus, say, a cell wall could form first, and then a replicating molecule could get trapped in it, and find the protective covering and closed environment improved it's ability to reproduce. then, any replicating molecule which could also replicate the cell wall would have an advantage over those that couldn't, and so on and so forth. Those many possibilities are not equally likely, and it would be jumping the gun to assume the more basic proteins necessary for life are somehow rare or unlikely to form on their own, when in reality, most abiogenesis experiments generate some of them.

I said tests showed it unlikely and even if it was possible to make small changes it takes a very long time. I used the example of how scientists talk about the millions of years it takes for something to evolve or the 3 plus billion years it took to go from single celled life to multi celled life. Hoghead 1 said that they know how evolution works from the fossil records. I said the fossil records show that it took a long time anyway.

I dont even know why geology was brought into it anyway as I was talking about how long it takes evolution to evolve complex life to show that its not an easy thing to do and requires time. Going from pint A to point B isn't just a case of a straight line and easily finding the right ingredients. The evidence shows that there is a lot more to making life and mutations through natural selection doesn't seem to have what it takes to do it because of the hit and miss process it involves. What we see is that many different and distantly related creatures find similar designs right down to the molecular level over and over again as though the code for life was pre determined or the genetic info is somehow available to many creatures without having to somehow find it through adaptations. That there are set paths that are followed rather then a tit for tat process of trial and error.
Mutations are very common, and single celled organisms have huge populations. Every person on the planet has 40-60 approximate mutations in their DNA that they don't share with either of their parents. So, let's do the math, giving highly critical numbers towards benign mutations at 5% (even though they have been measured to occur at a much higher rate than that). Currently, about 353,000 people are born per day, making the number of mutations in the human population per day between 14,120,000 and 21,180,000. Let me be extra skeptical, and cut the lower number in half and use that in the calculation for the number of mutations in the human population per year, which, when I do that, comes out to 2,576,900,000 mutations per year. Now, to apply the 5% for how many of those will be benign, and that comes out to 128,845,000 benign mutations in the human population per year currently. I know that this isn't exactly representative for the size of the human population historically, but I'm using an example of how prevalent benign mutations can be. Consider also that a few petri dishes of bacteria can have a higher population than the current ones for our own species, and you begin to see exactly how frequent benevolent mutations occur.

Inevitable comment: "But Sarah, aren't malevolent mutations way more common than benevolent ones?" Actually, the majority of mutations are neutral, meaning they don't provide any benefit or detriment. In reality, negative mutations are a bit more frequent than beneficial ones, but through a combination of being selected against through death and reproductive failure, the worst of them will never become prominent in any population (think of how common miscarriages are. One of the common causes is detrimental mutations in genes necessary for proper development and living). Hence, even if the frequency of bad mutations was something crazy, like 80%, and benign mutations were only a fraction of a percent, natural selection would still act upon them; evolution would just be slower.

Additionally, it is not uncommon for single genes to have multiple impacts on the body, so even changing one gene can have a huge immediate effect on physiology.
 
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I will point that "scientists talk about the millions of years it takes for something to evolve", is not right, stevevw. Scientists state that evolution happens all of the time. A specific species can evolve in a few thousand years from its parent population. Or less time for bacteria with their much shorter generations. It is not a single celled species jumping to multi celled species in 3 billion years as implied. It is single celled species evolving new species with new features until one new feature depending on the other features is joining together as a multicellular animal.
 
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Hoghead1

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I will point that "scientists talk about the millions of years it takes for something to evolve", is not right, stevevw. Scientists state that evolution happens all of the time. A specific species can evolve in a few thousand years from its parent population. Or less time for bacteria with their much shorter generations. It is not a single celled species jumping to multi celled species in 3 billion years as implied. It is single celled species evolving new species with new features until one new feature depending on the other features is joining together as a multicellular animal.
Yes, true. Bacteria have been induced to undergo "macro-evolution" in the lab.
 
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