I prefer to stick with the interpretation of the Church from the beginning and the Saints, the interpretation of the Church didn't change so even if I respect your opinion (altough I find it insulting to the Most Holy Theotokos), here is what I believe and what the Church believes:
First, we must understand that the term brother has a wide semantic range in Scripture. It can mean a uterine brother, an extended relative, or even a spiritual brother. In Genesis 13:8 and 14:12, we read of one example of brother being used to describe an extended relationship: Abraham and Lot. Though they were actually uncle and nephew, they called one another "brother." Moreover, in the New Testament, Jesus told us to call one another "brothers" in Matthew 23:8. The passage obviously does not mean to suggest that all Christians have the same physical mother.
Second, if we examine more closely the example of James, one of these four "brothers of the Lord" mentioned in Matthew 13:55, we discover him to be a cousin or some other relative of Jesus rather than a uterine brother. For example, Galatians 1:18-19 informs us: "Then after three years I [Paul] went up to Jerusalem to visit Cephas, and remained with him fifteen days. But I saw none of the other apostles except James the Lord’s brother."
Notice, the "James" of whom Paul was speaking was both a "brother of the Lord" and an "apostle." There are two apostles named James among the 12. The first James is revealed to be a "son of Zebedee." He most likely would not be the "James" referred to because according to Acts 12:1-2 he was martyred very early on. Even if it was him, his father was named Zebedee, not Joseph.
Paul more likely is referring to the second James who was an apostle, according to Luke 6:15-16. This James is revealed to have a father named Alphaeus, not Joseph. Thus, James the apostle and Jesus were not uterine brothers. Easy enough. Some will argue, however, that this "James" was not an apostle or that he was not one of the original 12. Though this is a possibility—others in the New Testament, such as Barnabas in Acts 14, are referred to as "apostles" in a looser sense—the argument from Scripture is weak. When Paul wrote about going "up to Jerusalem" to see Peter, he was writing about an event that occurred many years earlier, shortly after he had converted. He was basically going up to the apostles to receive approval lest he "should be running or had run in vain." It would be more likely he would have here been speaking about "apostles" (proper), or "the twelve."
The Church has always understood these passages as not referring to other children of the Virgin Mary. In fact James and Joseph, "brothers of Jesus," are the sons of another Mary, a disciple of Christ, whom St. Matthew significantly calls "the other Mary." They are close relations of Jesus, according to an Old Testament expression.
That regarging Mary, now regarding Holy Icons and their supposed "idolatry":
The scriptures tell us that Jesus Christ is the image or “form” of God (εἰκὼν τοῦ θεοῦ): “He is the image of the invisible God, the firstborn of all creation” (Col. 1:15). While the Father and Spirit are both formless and invisible (1 Tim. 1:17; Heb. 11:27; 1 John 4:20), the ὑπόστασις or person of the Son is revealed to us in the God-Man Jesus Christ: “No one has ever seen God; the only Son, who is in the bosom of the Father, he has made him known” (John 1:18).
God “became flesh and dwelt among us” (John 1:14), as the prophetic Emmanuel indicates (Matt. 1:23). When we look at Christ, we see the Father, and Jesus Christ is the “exact counterpart of [the Father’s] person” (Heb. 1:3). This word translated by the EOB as “counterpart” is χαρακτὴρ, implying something like an image stamped into a wax seal. Through the Incarnation, God made himself known to us as a circumscribed, touchable, breathing person—a person that was born, grew old, ate and drank, suffered, was buried, and resurrected after three days.
So when Calvin and his followers claim that depicting God in any way detracts from his glory, we must only point to Christ, for it is in the person of Jesus Christ (most importantly, at least) that we see the face of God. When we praise, worship, and magnify Jesus Christ, we are offering praise, worship, and honor to the all-holy Trinity: Father, Son, and Holy Spirit. Similarly, when we pay honor to the image of the Son of God in icons, we are paying honor to the prototype—to Jesus Christ himself. And when we honor the Saints, we are honoring the God whose uncreated light shines through their halos. The uncreated light of the shimmering gold leaf as it reflects the light of our oil lamps and candles—symbolic of the faithfulness of God shining forth in their saintly and Christ-like lives (which is, incidentally, why Orthodox Christians pay such close attention to the lives of the Saints).
Calvin’s arguments on this point seemingly presuppose that the Incarnation never happened; that the dispensation of the new covenant has yet to take place, and that there has been no Emmanuel or “God with us,” a God we can hear, see with our own eyes, and touch (1 John 1:1). These sorts of arguments are fitting for a religion such as Islam, but they are not the Christian Gospel; the Gospel of God made flesh, dwelling among us for our salvation.
Also missing from this presentation is any mention of the times when God commands his people to relate to him through an intermediary such as the bronze serpent, a relic that even miraculously healed people of their infirmities (Num. 21:9).
The flaw in Calvin’s viewpoint rests not only in Christology, but also in anthropology (as the two are inextricably linked). Mankind is created “according to the image of God,” as in the Greek translation of Genesis—κατʼ εἰκόνα θεοῦ (Gen. 1:27). And that image of God is Christ. Being created in the image of Christ, human beings are oriented towards a teleological purpose of transformation according to God’s likeness in him. This is our destiny, and why we are created: To become like Christ; to become like God. To be anything less is to be less than fully human, as Christ is the true and final Adam (1 Cor. 15:45).
Regarding "praying to dead people", we do not pray to dead people.
You ask in what sense do we pray for the souls of the departed. Why, in the same sense that we pray for the souls of those with us because Christ is Risen, trampling down death by death. The barrier between living and dead has been eliminated due to the Resurrection of Christ. Those who are departed are just as much with us and just as much a part of the Church as those who we see living on this earth. There is no longer any separation. And so not only do we pray for them, but they also pray for us; in the same way that you might ask your friends to pray for you and in turn pray for them so also do we pray for each other without concern for the separation of death.
When we pray for either the living or the dead we use the same prayer: "Lord have mercy", to express our desires. We do not know what to pray for even for those with whom we live because only God knows what is best for our salvation, and so we say "Lord have mercy". Likewise we do not know the needs and concerns of the departed, but God does and trusting in His knowledge we say, "Lord have mercy"
We do know that, like all of us, those who have departed require forgiveness of sins, and that they look for a "place of rest" in the bosom of Christ and so we make this petition, that God will provide these things, but again as for specifics about how this should happen we simply conclude with "Lord have mercy".
Some of the confusion might occur in that most Protestant confessions teach that the judgment after death determines the eternal state of the soul. Not so, according to the Tradition and teaching of the Orthodox Faith. The particular judgment immediately after death only determines the state and "residence" of the soul in the spiritual world and that judgment is based on who our spiritual "friends" are. Do we have more converse with angels or demons? Do we devote ourselves more to the saints or to sinners? Are we attached to the world or to the Kingdom of God? Do we act like Satan or Christ? Whatever we are like, there we are placed in the spiritual world. And the demons are diligent in attempting to demonstrate that we are tied to them and not to Christ and so any and every unconfessed sin, no matter how seemingly small and insignificant is brought out by them as accusations against us and the angels on the other hand counter this accusation by a description of our righteous deeds which indicate our change of heart and life. But do not confuse this particular judgment and temporary disposition with the eternal disposition of the soul to be determined at the Great Judgment. Then, the soul being reunited with the body thanks to the general resurrection, each person will be judged by God Who sees within either the spark of grace or none and those who have that spark will be brought into the Kingdom of God and those who do not will be cast into outer darkness - finally and eternally. So you see that when we pray for the departed, we do so knowing that the final judgment has not yet occurred and while we don't know what the exact needs of the departed are, we can simply lift them up to God calling out for His mercy.